PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001797.1_g570.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Dof
Protein Properties Length: 226aa    MW: 24160.4 Da    PI: 8.5752
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001797.1_g570.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1282.8e-401676262
                     zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                               ++++lkcprCds+ntkfCyynny+lsqPr+fCk+CrryWtkGG+lrn+PvGgg+rkn k+s
  Pav_sc0001797.1_g570.1.mk 16 EQEQLKCPRCDSSNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGSLRNIPVGGGSRKNTKRS 76
                               57899****************************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MQDPTSFQPM KPQFPEQEQL KCPRCDSSNT KFCYYNNYNL SQPRHFCKNC RRYWTKGGSL  60
RNIPVGGGSR KNTKRSSSSA SKRSSSTSSS SVSSSSAATA AAQNPDPQPD RTRVYGPKID  120
QDRGVLDISG SFSSLLASNG QFGSLLEGLN PNGSGLKLMQ MGDFGVNLDS GNGLNSDPGV  180
NPGLEAQSNG NPESYMGLQN GDSSSCWNGG NGWPDLAIYT PGSSFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51700.15e-39Dof family protein