PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001801.1_g360.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NF-YB

Protein Properties

Length: 160aa MW: 17657.9 Da PI: 8.6867

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001801.1_g360.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	42.1	2.1e-13	8	97	5	88
NF-YB 5 drflPianvsrimkkvlPanak......iskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplk 84 ++lP a v r++k l + +k + k+a e + fi ++++ a+d c+++kr+ti++dd+l al ++ f ++++pl+ Pav_sc0001801.1_g360.1.mk 8 AEELPKAIVRRVVKDKLSQCSKgdgdltLHKEALLAFSESARIFIHYLSATANDICKEKKRQTISADDVLKALEEIEFSEFIKPLE 93 5689**********9987773344335677777889*********************************************9 PP NF-YB 85 vylk 88 + lk Pav_sc0001801.1_g360.1.mk 94 ASLK 97 9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 160 aa Download sequence
MAKVVADAEE LPKAIVRRVV KDKLSQCSKG DGDLTLHKEA LLAFSESARI FIHYLSATAN 60 DICKEKKRQT ISADDVLKAL EEIEFSEFIK PLEASLKEKN PGKNAGKNAE KSGGKNAGKQ 120 KAGTSKAKEV KKKRKLEEPS SQKQKEKEED NQDENGSDDE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	131	136	KKKRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27470.1	9e-43	NF-YB family protein