PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001837.1_g060.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 299aa    MW: 34125.2 Da    PI: 7.6579
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001837.1_g060.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like95.34.8e-302887155
                    G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ.....kYRl 55
                               kprlrWtp+LH+rFv+av++LGG+ekAtPk++l+lm++kgLtl+h+kSHLQ     kYRl
  Pav_sc0001837.1_g060.1.mk 28 KPRLRWTPDLHDRFVDAVTKLGGPEKATPKSVLRLMGLKGLTLYHLKSHLQlvslqKYRL 87
                               79***********************************************75222227876 PP
2Myb_DNA-binding62.86.8e-203078145
                               TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45
                               r+rWT+++++++vdav++lGg+   t+k++ r mg kg+tl+++ks++q
  Pav_sc0001837.1_g060.1.mk 30 RLRWTPDLHDRFVDAVTKLGGPekaTPKSVLRLMGlKGLTLYHLKSHLQ 78
                               89**********************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MERSYGGGCD GEGNCGYENG VMMTRDPKPR LRWTPDLHDR FVDAVTKLGG PEKATPKSVL  60
RLMGLKGLTL YHLKSHLQLV SLQKYRLGQH ARKQNSGEEH TRENNRDSYV HFSHHHSTGS  120
SAKSSRGDCY AHFPYEPAWI LMNENAENRT LPFSEALKCQ IDVQNRLQEQ LEVQKKLQMR  180
IEAQGKYLQA ILEKAQKGLS LDMKGPTTIE ATRAQLTDFN LALSNFMENI NEEDRRGKSN  240
GSTFEIYEEG NTEENRDAKL KVERGFINFD LNTKGSYDYV GSNAGDFEPR RFRLQDTTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45580.13e-69G2-like family protein