PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001900.1_g300.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 264aa    MW: 29475.4 Da    PI: 5.3143
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001900.1_g300.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.7e-19126176255
                        AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                +y+GVr+++ +g+++AeIrd    + k +r++lg+f taeeAa a+++a+++++g
  Pav_sc0001900.1_g300.1.mk 126 HYRGVRRRP-WGKYAAEIRDsT--R-KGARVWLGTFETAEEAALAYDKAALRIRG 176
                                8********.**********32..2.24*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MAVHSDPHAA EVASEAILEN VWASFIGVDG VKEEAKKTTE LSKPWKELPP LDGREGSMEI  60
LERLPSLGRW ISMGTEAWEE LLDSCVVPGH NMEVSSNVKL EGNGATNSEF EAKVEKRREK  120
VEIMKHYRGV RRRPWGKYAA EIRDSTRKGA RVWLGTFETA EEAALAYDKA ALRIRGSKAI  180
LNFPPETVAK AMGLGCFNIC SSTNVSNSRK RALREWEESV EAMTDGKPAL KRKASMQNML  240
GDEFDVFEFQ DLGSDYLDSL LSSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.12e-34ERF family protein