PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001974.1_g300.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 328aa    MW: 36862 Da    PI: 7.5256
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001974.1_g300.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like97.41e-30246300155
                    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                k+r+rW+++LHe+Fve+v++LGG++kAtPk+il++m ++gLt+ hvkSHLQkYR+
  Pav_sc0001974.1_g300.1.mk 246 KTRIRWNQDLHEKFVECVNRLGGADKATPKAILKMMCLDGLTIFHVKSHLQKYRI 300
                                68****************************************************7 PP
2Myb_DNA-binding45.61.7e-14250299348
                                SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
            Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                                rW ++++e++v++v++lGg    t+k+I ++m   g+t  ++ks++qky+
  Pav_sc0001974.1_g300.1.mk 250 RWNQDLHEKFVECVNRLGGAdkaTPKAILKMMClDGLTIFHVKSHLQKYR 299
                                9*****************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MNEQKIDCQE RIIQQSHGLI SDFNFELGSQ SSQIFDLQQQ AWNMGVCVQQ PTEDQPNMSQ  60
LQNHGLPRSP SSIMSRFESP ASAFYATERC MGFSQYHSQV GNSQFPSGQT YNESYSSMDS  120
SEQADPNLDI RNTLQSVVKS QPSSYHQYQK SSEKPNQIPL PSNNLFEHQQ NKLHGESTAS  180
VRRPSLSLPP KENQDQAGCC NSFSTSPVTQ LSFFSQQGKQ SPRISSGNVS TTYGESPSTS  240
PVLSSKTRIR WNQDLHEKFV ECVNRLGGAD KATPKAILKM MCLDGLTIFH VKSHLQKYRI  300
AKYLPDTAEG KYEKRTTLNV EPQLDMKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.24e-47G2-like family protein