PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0002024.1_g200.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 205aa    MW: 23323.3 Da    PI: 9.6426
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0002024.1_g200.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP233.41.2e-104895255
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                               ++kGV    ++g W A+I+       + +r++lg+f +++eAa a++ a+ kl++
  Pav_sc0002024.1_g200.1.mk 48 KFKGVV-PQQNGHWGAQIYA------NhQRIWLGTFKSEKEAAMAYDSAAIKLRN 95
                               789996.566899****999......44**********99*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MEEDAASSMI SSVQRNVALE TSDSNDNDFG LLHPNKRARL DNDVSFAKFK GVVPQQNGHW  60
GAQIYANHQR IWLGTFKSEK EAAMAYDSAA IKLRNGKDLH RNFPWTNFTI QEPDFQNHHT  120
TDAIIKMIRD GSYPSKFDAF IRSQKQSQTE EMGKGQNSLR VHGDGKILCR QLFQKELTPS  180
DVGKLNRLVI PKKYAVELSK HQFGM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51120.15e-63RAV family protein