PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0002207.1_g430.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 285aa    MW: 32056.8 Da    PI: 5.0956
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0002207.1_g430.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.92.9e-192978255
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                y+GVr++  +g+WvAeIr+p++   r+r +lg+f taeeAa a++ a+++l+g
  Pav_sc0002207.1_g430.1.mk 29 EYRGVRQRT-WGKWVAEIREPKK---RTRLWLGSFATAEEAAMAYDDAARRLYG 78
                               69****999.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MENCRKSPLK PWKKGPTRGK GGPQNASCEY RGVRQRTWGK WVAEIREPKK RTRLWLGSFA  60
TAEEAAMAYD DAARRLYGPD AFLNLPHLQA SFNPALKSQK FKWFPSQNFI SMFPSCGLLN  120
INAQPSVHVI HQRLQELKQN GVLGQTTPSS SSSSNDSKPE VHIISDKTQI GSVAEKEKDV  180
EISSEKMIED NWEKPQIDLN EFLQQLGVLE KERQSEAIGT AGNFGVPESS VTELDDEFGP  240
FTDKNFNWDA LTEMHGISDQ GADASSFQVY DVNEELPFPT SIWDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.16e-84ERF family protein