PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0002207.1_g650.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 212aa    MW: 23989.9 Da    PI: 4.0329
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0002207.1_g650.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM31.17e-102666142
                        NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv 42
                               lp G++F Ptdeel+ +yLkkk++++ l++ + + evdiyk 
  Pav_sc0002207.1_g650.1.mk 26 LPIGYQFVPTDEELIEDYLKKKIKNELLPI-NRFCEVDIYKN 66
                               699************************999.67999999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MEESNIQVAN EIFDEAWLTN KYINDLPIGY QFVPTDEELI EDYLKKKIKN ELLPINRFCE  60
VDIYKNKRVK KKKNEEIADS VQSAHQDDHQ EYPSPLIANS NSSSSSLNHH YTSAGMSSGS  120
TTVNTEFGEP PYYIESFQNG ALSNYPWPIT SFNNDQTLDP ADTTHGLPMN TFSSPFSTDL  180
EPTNDTALAD PSTFSQFPHD DAEEDDNNSF DQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.22e-07NAC family protein