PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0002266.1_g230.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 96aa    MW: 10845 Da    PI: 4.0985
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0002266.1_g230.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.65.9e-08755347
                               SS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHTTTS-HHHHHHHHHHH CS
            Myb_DNA-binding  3 rWTteEdellvdavkqlGgg.....tWktIartmgkgRtlkqcksrwqky 47
                                WT eE + +  a++ +  +      W+++++ ++ g++  q+k+++  +
  Pav_sc0002266.1_g230.1.mk  7 EWTREENKAFEIAIATYNIEciekgEWEKVSSSVP-GKSVHQIKLHFMHL 55
                               7****************999***************.**********9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
MAGAIDEWTR EENKAFEIAI ATYNIECIEK GEWEKVSSSV PGKSVHQIKL HFMHLLMDVE  60
AIESDQGPLP DYKYDEDDGD DGDHGDTKEK EMSIVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49010.11e-14MYB family protein