PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0002286.1_g120.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 97aa    MW: 10888.3 Da    PI: 10.0693
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0002286.1_g120.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding285e-091154344
                               SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
            Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                               +WT+   +l+ +a + + ++   +W+ +a+ +g g++ +++k ++
  Pav_sc0002286.1_g120.1.br 11 SWTPKQNKLFEKALAVYDKDtqdRWHNVAKAVG-GKSVEEVKRHY 54
                               7********************************.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 97 aa     Download sequence    
MASLSSSRNS SWTPKQNKLF EKALAVYDKD TQDRWHNVAK AVGGKSVEEV KRHYEILVQD  60
LMHIESGQVP IPNYKGSGSS SSRGIGDEQR LMKNLKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.27e-43MYB_related family protein