PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0002318.1_g170.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 213aa    MW: 24095.6 Da    PI: 6.311
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0002318.1_g170.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY57.72.4e-1899147247
                                --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTE CS
                       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkv 47 
                                +Dg++WrKYGqK + ++++pr+Y+rCt++    C+++k+ e++ +d  +
  Pav_sc0002318.1_g170.1.mk  99 EDGHAWRKYGQKLILNAKHPRNYFRCTHKfdqACQATKHEETTPSDYMT 147
                                7***************************99999******9999987655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MLGSFSNTLF ISNGKEMKEF HHHDDQELII QVNTSGGGGG SGAGASSWDV DHLLDHAIKY  60
EASHEETCKS ASTSKDRRGS YKKRKTCHSW IKDSPALTED GHAWRKYGQK LILNAKHPRN  120
YFRCTHKFDQ ACQATKHEET TPSDYMTTQH HNQLSLSDYL VSPPDLPAFA SPGLMSGFAS  180
ANIAELDEDA IYRQMAWFNY DDFAYDEFLQ YMS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.17e-19WRKY family protein