PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0002318.1_g190.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 394aa MW: 43614 Da PI: 7.2326

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0002318.1_g190.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	56.8	4.3e-18	146	204	2	57
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--S CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHn 57 dDg++WrKYGqK+++++++pr+Y+rCt++ +C+++k+ e+ + + + + +H Pav_sc0002318.1_g190.1.mk 146 DDGHSWRKYGQKVIHNAKHPRNYFRCTHKfdqSCQATKHEEKPQPSDDHMMASHHQNHS 204 8*************************9999*****99987666666666666665 PP
2	WRKY	29	2.1e-09	356	376	2	22
--SS-EEEEEEE--TT-SS-E CS WRKY 2 dDgynWrKYGqKevkgsefpr 22 dDg++WrKYGqK+++++++pr Pav_sc0002318.1_g190.1.mk 356 DDGHSWRKYGQKVIHNAKHPR 376 8*******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MELSWPESVL SNRERVMEEL IQGRELASQL CRVLDDHKST LVSGCGGGDV GSAEGLSLMG 60 RLFLLNGKEA DGEIVSGDQI RGNSSGGGSA DSSSWDANHA IIKSEDFHEE MEISCKSAST 120 SKDRRGSYKR RRTSHSWTRD AQDLTDDGHS WRKYGQKVIH NAKHPRNYFR CTHKFDQSCQ 180 ATKHEEKPQP SDDHMMASHH QNHSSSCDYI VSPHPTAFKS VKEELMQGRE LAGQLCRVFD 240 DHKSTLDSGF GGGGGGSAEG LVDKILGSFA NALLILNGKE SDDQELVSGD QIQGISSGGG 300 SADSSSWDAN HAIIKSEDFH EEISCKSAST FKDRRGSYKR RRTSHSWTRD AQDLTDDGHS 360 WRKYGQKVIH NAKHPRYTLI GKSNINSNIR HKLK

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MELSWPESVL SNRERVMEEL IQGRELASQL CRVLDDHKST LVSGCGGGDV GSAEGLSLMG  60
RLFLLNGKEA DGEIVSGDQI RGNSSGGGSA DSSSWDANHA IIKSEDFHEE MEISCKSAST  120
SKDRRGSYKR RRTSHSWTRD AQDLTDDGHS WRKYGQKVIH NAKHPRNYFR CTHKFDQSCQ  180
ATKHEEKPQP SDDHMMASHH QNHSSSCDYI VSPHPTAFKS VKEELMQGRE LAGQLCRVFD  240
DHKSTLDSGF GGGGGGSAEG LVDKILGSFA NALLILNGKE SDDQELVSGD QIQGISSGGG  300
SADSSSWDAN HAIIKSEDFH EEISCKSAST FKDRRGSYKR RRTSHSWTRD AQDLTDDGHS  360
WRKYGQKVIH NAKHPRYTLI GKSNINSNIR HKLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46400.1	2e-18	WRKY family protein