PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0002348.1_g100.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 400aa MW: 41869.7 Da PI: 8.7396

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0002348.1_g100.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.3	9e-40	53	113	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+alkcprCds ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk+++ Pav_sc0002348.1_g100.1.mk 53 PEQALKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKRVR 113 6899******************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MMSSDNTPPG KPPPGTKGGE SLAAGGGGGG GASSRAKPTS SSSSGAKQQH PPPEQALKCP 60 RCDSPNTKFC YYNNYSLTQP RHFCKTCRRY WTKGGALRNV PIGGGCRKNK RVRSSSSNSR 120 LSCSLDSKDS AASSSSENMM LGGLKFFHGI SPAMDFQLGG LSSLPSRLHH NPSSGISFNN 180 NNNQFSAFGD VSGTSGLTIS TPLDTSASCN SFLGFNYPLT LGGGGGGGGG GGGDGFSATQ 240 NMMSSMNVHS SLASSIESLS SINQDLHWKL QQQRLAMLFG SGNDHDQSTQ TTQSQLEQQQ 300 KTQQIAPISL FQNLEVSTKA DHQHQHQVVG THGRREGASA SGDTATEWFF GNSYAPPVTP 360 TPTNSGGGNG GGGGNENTSN WQHGIQAWSS HDLQQYNALP

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MMSSDNTPPG KPPPGTKGGE SLAAGGGGGG GASSRAKPTS SSSSGAKQQH PPPEQALKCP  60
RCDSPNTKFC YYNNYSLTQP RHFCKTCRRY WTKGGALRNV PIGGGCRKNK RVRSSSSNSR  120
LSCSLDSKDS AASSSSENMM LGGLKFFHGI SPAMDFQLGG LSSLPSRLHH NPSSGISFNN  180
NNNQFSAFGD VSGTSGLTIS TPLDTSASCN SFLGFNYPLT LGGGGGGGGG GGGDGFSATQ  240
NMMSSMNVHS SLASSIESLS SINQDLHWKL QQQRLAMLFG SGNDHDQSTQ TTQSQLEQQQ  300
KTQQIAPISL FQNLEVSTKA DHQHQHQVVG THGRREGASA SGDTATEWFF GNSYAPPVTP  360
TPTNSGGGNG GGGGNENTSN WQHGIQAWSS HDLQQYNALP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	3e-32	Dof family protein