PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0002391.1_g060.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 289aa    MW: 31435.2 Da    PI: 8.0759
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0002391.1_g060.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like105.62.8e-3346100155
                    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                k+rlrWt++LH+rFv+a++qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  Pav_sc0002391.1_g060.1.mk  46 KQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRL 100
                                79****************************************************8 PP
2Myb_DNA-binding58.91.1e-184899148
                               TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                               r+rWT ++++++vda++qlGg+   t+k + r mg  g+t +++ks++qky+
  Pav_sc0002391.1_g060.1.mk 48 RLRWTSDLHDRFVDAITQLGGPdraTPKGVLRVMGvPGLTIYHVKSHLQKYR 99
                               89*************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MYHAKKFSTA SLVPHKPQSS EELANVGVVS GGSSVKSPTP SGGSGKQRLR WTSDLHDRFV  60
DAITQLGGPD RATPKGVLRV MGVPGLTIYH VKSHLQKYRL AKYLPESPAD GSKDEKKGSG  120
DSLSCSDSSP GVQINEALRM QMEVQKRLHE QLEVQRQLQM RIEAQGKYLQ KIIEEQEKLG  180
GVLKGSDVLP SAEDKQKSSQ LETAGDATAT PSSPRKKQKV DDGLPDGCTT SNVPPKADQK  240
NEFVGQWDRD LYGSDGGFGF NLQTEFKERD GDAAQKAPME LDPLCGSKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.18e-69G2-like family protein