PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0002442.1_g080.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 167aa    MW: 18711.6 Da    PI: 5.4913
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0002442.1_g080.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY54.91.7e-171091462259
                                EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY  22 rsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                                 sYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+
  Pav_sc0002442.1_g080.1.mk 109 ESYYRCTMDNCRVKKRVERLAEDPRMVITTYEGRHVHS 146
                                69***********************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MASTTSQAML NQQQGLFENE EGSNAQMGFF SIPPNLNFSS LGSLKAFGSS SIPPSTNLSE  60
TLLPSLTPLK HREDHNITTS SDFGGSQLLS LQRSTANLWA WGEVSDDHES YYRCTMDNCR  120
VKKRVERLAE DPRMVITTYE GRHVHSPSHD LDQDSQQASS HLNNFFW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39410.12e-25WRKY family protein