PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0002451.1_g020.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 279aa    MW: 31320.3 Da    PI: 7.8864
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0002451.1_g020.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.91.6e-20131180255
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                 y+GVr+++ +g+W+AeIrdp+    r +r++lg+f taeeAa+a+++a+ +++g
  Pav_sc0002451.1_g020.1.mk 131 NYRGVRQRP-WGKWAAEIRDPR----RaARVWLGTFTTAEEAARAYDKAAIEFRG 180
                                59*******.**********82....48************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MRSSYKRPKL NDPQPIHPAE PPMPLPPHRL TQDQELTVIV SALRNVVAGT ATTASMDFNS  60
LLPPLQYAAT SYPGATGSSC YSDALLTPSD LDTCNVCKIK GCLGCNFFPP PAQEEKANNK  120
KKGPKKRVKK NYRGVRQRPW GKWAAEIRDP RRAARVWLGT FTTAEEAARA YDKAAIEFRG  180
PRAKLNFPFP DTTLLTQETN SAQPAQPAQP SQPQQVVTEQ ETNNEFSREI EMTEIGKEKE  240
KEKEKEFWEM IGEDEIQHWM RMMDFATDHS SDSGNAHSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.18e-36ERF family protein