PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0002479.1_g670.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ARR-B
Protein Properties Length: 616aa    MW: 69070.3 Da    PI: 5.9964
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0002479.1_g670.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like764.9e-24199252155
                    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                k+r++W+ +LH++Fv+av+q+ G +k  Pk+il+lm+v+ Lt+e+v+SHLQkYRl
  Pav_sc0002479.1_g670.1.mk 199 KARVVWSVDLHQKFVKAVHQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 252
                                68*******************.9*******************************8 PP
2Myb_DNA-binding39.41.4e-12201251148
                                TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
            Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                                r  W+ ++++++v+av+q G +   +k+I   m+   +t++++ s++qky+
  Pav_sc0002479.1_g670.1.mk 201 RVVWSVDLHQKFVKAVHQIGFDkvGPKKILDLMNvPWLTRENVASHLQKYR 251
                                678***********************************************7 PP
3Response_reg81.82.1e-27191271109
                                EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTT CS
               Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahge 82 
                                vl+vdD+p+ +++l+++l+k  y +v+++  ++eal+ll+ek+  +D+++ D++mp+mdG++ll++   e  +lp+i+++  ge
  Pav_sc0002479.1_g670.1.mk  19 VLVVDDDPTWLKILEKMLKKCSY-DVTTCGLAREALNLLREKKdgYDIVVSDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGE 100
                                89*********************.***************999999**********************6644.8*********** PP

                                HHHHHHHHHTTESEEEESS--HHHHHH CS
               Response_reg  83 eedalealkaGakdflsKpfdpeelvk 109
                                 + + + ++ Ga d+l Kp+ ++el++
  Pav_sc0002479.1_g670.1.mk 101 TSRVMKGVQHGACDYLLKPIRMKELRN 127
                                ************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 616 aa     Download sequence    
MESSFSSPRN DSFPAGLRVL VVDDDPTWLK ILEKMLKKCS YDVTTCGLAR EALNLLREKK  60
DGYDIVVSDV NMPDMDGFKL LEHVGLEMDL PVIMMSVDGE TSRVMKGVQH GACDYLLKPI  120
RMKELRNIWQ HVFRKKIHEI RDIESHESIE GIQLIRNGSD QYDEGYFFSA EDLTSSRKRK  180
DVDNKYDDKD FSDCSSTKKA RVVWSVDLHQ KFVKAVHQIG FDKVGPKKIL DLMNVPWLTR  240
ENVASHLQKY RLYLSRLQKE NDIKSSFGGT KHSDYSSKDL QGILSVQNSI NIQQNDVAHG  300
SYRFSGNNLV AQNADPKSNE GDIKGIDSEP VAEPKKGTTG NIPDSQKTRS SQMDFSSSYT  360
ETKKGLVGNV PHSQKIRSSQ MCVNHSFASV ESEVNFTAFD STIPATYSWN QIQLEKEPKP  420
LIQLNNGFSK PPLPGPHHHF QVDQLQSIPS ISSRPSIPGG DVTGSSKSKP SYSEYTNHHG  480
SRVSPTISPT ISATDSFPGQ TKSCVVDHQV SETISTSTSN MKNQGINLST DLESAQRNLI  540
LGSTSPFASL DDEFQICWYQ GDCYGMNLEL QNIEFSEYTD PTHVTEVPAH LYDALRFEYP  600
CDPSEYCVLD QGLFIA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67710.11e-137ARR-B family protein