PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0002493.1_g120.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HSF

Protein Properties

Length: 355aa MW: 41160.2 Da PI: 4.972

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0002493.1_g120.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	115.1	4.3e-36	34	126	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhks 85 Fl+k+y+i++d+++++++sws+++nsfvvld+++f+ ++Lp+yFkh+nf+SFvRQLn+YgF+kv++++ weF+++ Pav_sc0002493.1_g120.1.mk 34 FLTKTYDIVDDPTTNDIVSWSRDNNSFVVLDPQKFSMSLLPRYFKHNNFSSFVRQLNTYGFRKVDTDR---------WEFANEG 108 9***************************************************************99.........*** PP XXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 86 Fkkgkkellekikrkkse 103 F +g+k ll++i+r+k++ Pav_sc0002493.1_g120.1.mk 109 FLRGQKPLLKNIRRRKTS 126 *************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MNSDHDPVSL SSSGAAPDHP LPMEKLFDQG PPPFLTKTYD IVDDPTTNDI VSWSRDNNSF 60 VVLDPQKFSM SLLPRYFKHN NFSSFVRQLN TYGFRKVDTD RWEFANEGFL RGQKPLLKNI 120 RRRKTSYHPK ASHKALDSCV EVGKFGLDGE IDQLRRDKQV LMGELVKLRQ QQQTTRVYLH 180 GMENRLKRTE MKQQYLMNFL ARAMKNPNFV QQLAQQKDKR NELEEVITKK RRRTIEQGPS 240 NFEVDELGQV GVETFVKVEP QEYDDIYDHF EKPELDTFAI DMLGITGSQI VHDEEKCIEK 300 QEGNESGSKD PDKSFWHELL NESIDEEIGM LGVQEEDEDV DVFVEELVHL ASCPK

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MNSDHDPVSL SSSGAAPDHP LPMEKLFDQG PPPFLTKTYD IVDDPTTNDI VSWSRDNNSF  60
VVLDPQKFSM SLLPRYFKHN NFSSFVRQLN TYGFRKVDTD RWEFANEGFL RGQKPLLKNI  120
RRRKTSYHPK ASHKALDSCV EVGKFGLDGE IDQLRRDKQV LMGELVKLRQ QQQTTRVYLH  180
GMENRLKRTE MKQQYLMNFL ARAMKNPNFV QQLAQQKDKR NELEEVITKK RRRTIEQGPS  240
NFEVDELGQV GVETFVKVEP QEYDDIYDHF EKPELDTFAI DMLGITGSQI VHDEEKCIEK  300
QEGNESGSKD PDKSFWHELL NESIDEEIGM LGVQEEDEDV DVFVEELVHL ASCPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-114	HSF family protein