PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0002564.1_g110.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 92aa    MW: 11262.1 Da    PI: 5.5418
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0002564.1_g110.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM57.16.4e-18855149
                        NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49
                               +ppGfrFhPt+eelv +yLk+k+++ +++l +vi ++d+yk+ePwd++ 
  Pav_sc0002564.1_g110.1.mk  8 VPPGFRFHPTEEELVGYYLKRKINSLQIDL-DVIIDIDLYKIEPWDIQG 55
                               69****************************.99**************82 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MDHTESCVPP GFRFHPTEEE LVGYYLKRKI NSLQIDLDVI IDIDLYKIEP WDIQGTYIYI  60
YIHMKIELNL IFDLDRWIWH KLNIYGYTRL KQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.11e-17NAC family protein