PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0002584.1_g370.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 344aa    MW: 37297.3 Da    PI: 10.0181
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0002584.1_g370.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.71.3e-10171218455
                                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  Pav_sc0002584.1_g370.1.mk 171 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 218
                                8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MDPPTLVNEC SFSNANATSF NLSEIWQFPM NGGGASVGDS GGGGALGLRR PNFAQSFAQF  60
GDVSGAIRDV LAGSDPNPMS LDVRGSHGGG AARKRRDAED ESPKSSGHIG GSDCDGKRLK  120
TAARSTDETR ELKAEAETSS GKPVEQSTQP PDPPKQDYIH VRARRGQATD SHSLAERARR  180
EKISERMKIL QDLVPGCNKV IGKALVLDEI INYIQSLQRQ VEFLSMKLEA VNTRMNPGIE  240
VSVNKHSILL QWHLVHNLRG SIVGVLHRSG CTCRLVVVLK EHSLERPLRP GIKASRQMLP  300
PPSLSVKKSI PLPHYVKSRK TSFSYPTSEH GVVVLAVYGK AAQT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.21e-72bHLH family protein