PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0002613.1_g290.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 257aa MW: 29853.5 Da PI: 5.8013

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0002613.1_g290.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	84.6	1.6e-26	77	167	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkle 82 +fY +Y+++ GF+vr++++++s+ n++++ ++fvCskeg+r+++ +++++ + ++tr gC+a++++ +++ kw+vtk++ Pav_sc0002613.1_g290.1.mk 77 EFYVAYGRRSGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVHRKDR-VlpPPPVTREGCQAMIRLALRDGLKWVVTKFV 159 6****************************************99883332.245899********************** PP FAR1 83 leHnHela 90 +eHnH+l+ Pav_sc0002613.1_g290.1.mk 160 KEHNHKLM 167 ****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence
MDHQSVHGFD SDESDLDMHA ETYENNEGME DVLSENLDLC LDEKEGIAEP SADLPMNIEA 60 LEPNIGMEFN SRDEAREFYV AYGRRSGFTV RIHHNRRSRV NNQVIGQDFV CSKEGFRAKK 120 YVHRKDRVLP PPPVTREGCQ AMIRLALRDG LKWVVTKFVK EHNHKLMSPS KVPWRGSGKH 180 LASEDEKDKR IRELSLELYN ERQKCKRRCA AYEEQLNLIL KDLEKHTEHM SKKVADIVQS 240 IREIEEEQSE DSDSGWT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	9e-40	FAR1 family protein