PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0002659.1_g180.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 149aa MW: 17185 Da PI: 9.8901

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0002659.1_g180.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70.8	3.1e-22	31	118	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 k+Yn YAk++GF vr ++k+s+ +ge+++++fvC k+g++e++ + ++r+r rtgC akl v k + ++k+ v k+++ Pav_sc0002659.1_g180.1.br 31 KMYNVYAKKAGFGVRCYTTKTSRVTGEVVRKEFVCCKQGHTESKVGR---KKRRRGCVRTGCMAKLAVLKPYeKNKYTVVKFKE 111 68*************************************998766...999999*******999988******* PP FAR1 84 eHnHela 90 eHnHe++ Pav_sc0002659.1_g180.1.br 112 EHNHEMT 118 **986 PP

Sequence ? help Back to Top
Protein Sequence Length: 149 aa Download sequence
MESELEVTPE VSVEFKPQVG LEFDSLEDVL KMYNVYAKKA GFGVRCYTTK TSRVTGEVVR 60 KEFVCCKQGH TESKVGRKKR RRGCVRTGCM AKLAVLKPYE KNKYTVVKFK EEHNHEMTAY 120 DKVHLLRSHR KLVASIQLHQ NGFNCILNL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	77	103	RKKRRRGCVRTGCMAKLAVLKPYEKNK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-14	FAR1 family protein