PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0002792.1_g020.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 182aa    MW: 20676.5 Da    PI: 6.1164
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0002792.1_g020.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM57.54.8e-181484170
                        NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekew...yfFskrdkkyat 70
                               +ppGfrF+Pt+eel+ +yL+k+v+ +k++l +vi+++d++k+ePwd++  +++ee+ w   + F+k++k+ +t
  Pav_sc0002792.1_g020.1.mk 14 VPPGFRFQPTEEELLLYYLRKRVSCEKIDL-DVIRDIDLTKLEPWDIR-GAATEEEGWvvcHIFIKKKKNLKT 84
                               69****************************.9***************8.444567777677999999987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MSSISVSVNG QCQVPPGFRF QPTEEELLLY YLRKRVSCEK IDLDVIRDID LTKLEPWDIR  60
GAATEEEGWV VCHIFIKKKK NLKTLNSPSN SSFNYMGINT GHMLDSYYDE GSLEQMFQQV  120
ERNCKEENKA EVVKYNTKPL IYTSNQVIGA PDPKSLHQIV SGLTSWAAFD RLIASQLNGH  180
TA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46770.14e-20NAC family protein