PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0003003.1_g010.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 166aa    MW: 18010.2 Da    PI: 8.6321
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0003003.1_g010.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.57.1e-182170255
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                ykG+r +k +g+WvAeIr+p   +kr r++lg++ t+  Aa+a++ a  +l+g
  Pav_sc0003003.1_g010.1.mk 21 PYKGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSTPIAAARAYDTAVFYLRG 70
                               69*****99.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MDGGGGVTET NRKRGVENDK PYKGIRMRKW GKWVAEIREP NKRSRIWLGS YSTPIAAARA  60
YDTAVFYLRG PSARLNFPEA LVVEGGGVGC GCGDMSAASI RKRATEVGAR VDAVETAMRH  120
HRGGAAAPNR GAAEIKPCVD GFVDRVDLNK MPDPENSDGD CEWETN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23340.11e-55ERF family protein