PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0003033.1_g200.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 124aa    MW: 14742.8 Da    PI: 9.849
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0003033.1_g200.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.80.000727995823
                               EEESSHHHHHHHHHH.T CS
                    zf-C2H2  8 ksFsrksnLkrHirt.H 23
                               k+F+++s L +H+ + H
  Pav_sc0003033.1_g200.1.mk 79 KVFTDQSALDKHMDKvH 95
                               89***********9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    
MPSVADADCP RPWVFGRVSK IHVSLYEWRV RYGTNNSQEE LAHLIKRHKH APEVQGLRAS  60
DNRKRRKLCV HKNGYDHAKV FTDQSALDKH MDKVHPRWED LYPQCQKKKC HKVFLNNEEY  120
EAHK