PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0003174.1_g080.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 166aa    MW: 18291.8 Da    PI: 8.3273
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0003174.1_g080.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH154.5e-0556951054
                               HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                        HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                               + R +++ +++  L++l+ +      +K + a++L +A++YI+ L
  Pav_sc0003174.1_g080.1.mk 56 KERKEKLGERIVALQQLVSPY-----GKTDTASVLLEAMDYIRFL 95
                               6778889999999***99999.....9****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MIVSSLCNAG ARFSGEEGID VRNMTEHKRS PCSVDQSSFT SLASKRHKTD LSISTKERKE  60
KLGERIVALQ QLVSPYGKTD TASVLLEAMD YIRFLHEQVK VLSAPYLEST PTAKMQELEP  120
YSLRSRGLCL VPVSCTAGVA QSNGADIWAP IKNTSPKFEN AISQFH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.32e-65bHLH family protein