PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0003258.1_g070.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 196aa MW: 23007.1 Da PI: 8.9862

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0003258.1_g070.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	56.5	9.6e-18	7	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk...leleevikevdi..ykvePwdLpkkvka...eekewyfFskrdkkyatgkrknr 76 +p GfrF+Ptd+e+v +L+ + ++k + +++i+ +d+ +k+eP+++ +k+ + ++++yf s +k ++ kr r Pav_sc0003258.1_g070.1.br 7 VPLGFRFRPTDQEIVGSFLHTLLVERKplmPPYSNFIRACDLfgNKLEPSEIWNKYGGpqlVDQDLYFLSGLKKLTP--KRMDR 88 589****************988877787666778*833589*7544333335668888888877655..68888 PP NAM 77 .atksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + g+W++t + k v + + + +g k+ + + + + + e+t+W+++ey l Pav_sc0003258.1_g070.1.br 89 sVGQGGTWSETESFKLVEDDneNPNPIGRKRKFRYEN--KGSEEHTRWLLDEYGL 141 677899***9999997444455****984..334469******75 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
MAHHQNVPLG FRFRPTDQEI VGSFLHTLLV ERKPLMPPYS NFIRACDLFG NKLEPSEIWN 60 KYGGPQLVDQ DLYFLSGLKK LTPKRMDRSV GQGGTWSETE SFKLVEDDNE NPNPIGRKRK 120 FRYENKGSEE HTRWLLDEYG LFVGPKNDYN DRSYDFDFVI CRMRKNDRAL NFPFSLLKRK 180 GYADKELATQ HHLPFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01520.1	6e-08	NAC family protein