PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0003267.1_g020.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 230aa    MW: 26044.2 Da    PI: 6.1681
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0003267.1_g020.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.63.2e-091965347
                               SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
            Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                               +WT  Ed+l+ +a  ++  +   +W++Ia++++ g+t++++ +++ ++
  Pav_sc0003267.1_g020.1.mk 19 PWTRFEDKLFEQALVRFSEDlpdRWERIAEEVP-GKTPEEVLEHYETL 65
                               7*****************99*************.**********9875 PP
2Myb_DNA-binding44.82.8e-14115159347
                                SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
            Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                                +WT++E++l++ + k++G+g+W++I+r +  +Rt+ q+ s+ qky
  Pav_sc0003267.1_g020.1.mk 115 PWTEQEHKLFLIGLKKFGKGDWRSISRNVVVTRTPTQVASHAQKY 159
                                8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MFQETAPCWS SMAQSASAPW TRFEDKLFEQ ALVRFSEDLP DRWERIAEEV PGKTPEEVLE  60
HYETLVHDVL EIDSGRVELP SYADDSVVGW DTASQISFGS KLNKHGEPER KKGTPWTEQE  120
HKLFLIGLKK FGKGDWRSIS RNVVVTRTPT QVASHAQKYF LRQSSVKKER KRSSIHDITT  180
VESNSVAVPA DRNWIPPPGV PAQQPPLQQP QGHLPDQGGS MGYQDFGYPM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.12e-69MYB family protein