PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0003383.1_g150.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ERF

Protein Properties

Length: 1253aa MW: 140431 Da PI: 5.7196

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0003383.1_g150.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	37.5	5.9e-12	230	276	6	55
AP2 6 VrwdkkrgrWvAeIrdpse.ngkrkrfslgkfgtaeeAakaaiaarkkleg 55 +r+++ ++rW A + + +g +k ++lg+f+t+eeAa+a++ a +++g Pav_sc0003383.1_g150.1.mk 230 IRRNSDNKRWQAK---VGKgRG-CKGIYLGTFDTEEEAARAYDVAVIRMKG 276 699999*****...655455.9*******************999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1253 aa Download sequence
MPLRETLLAL STMNSSDTVY FPSPSSTHSI NSESRNYSPV FLNDFVIHPN QRHGLSLPMQ 60 SKNFYASELN DGFNNFHNNT SEVRQSHPTE FYPPSTLESP FFEAPNYYNN FPISNHPFSS 120 SLHDNGFTGG NNQNCNCFNM YGEPLISDSC SDEEDNGGKK KRKRHRKSKH TFGQRSSSGY 180 DTEEEAAKAY DIAALKLWGK SATLNFPLRK YRKDLKKMKR MSKEDYFNHI RRNSDNKRWQ 240 AKVGKGRGCK GIYLGTFDTE EEAARAYDVA VIRMKGITSV TNFDQSEYDV KGILECETLP 300 IGKGASKRVR WSSVDDVLKK GRNTKKKKPM LQLNNGDSSG ISKLIPRIPQ SCSSFEPTTH 360 QILPTLHNSN PTQYVDPFLR YAFQDTDIQN NQFLRYSNVH PSSQVPLPGY RNPNFQTNPS 420 FNNWAGTFGG GDNSEANFQT NPSVNNWVGA FGGGENSEGN GINVGGSQIY GTLDPTMAQI 480 GDDNSGYNLG RGIEHMEPLN QFAPSIPPQN QEFDQLDQYS SDAYGQCNNE SSSSSYLLQD 540 SLQVPNYTPT IDPTFLPGLT NLDPGPSYVG ESYDSVVPEA ILAAMLAETN ESCSRDIMNE 600 PLTVFDYEVP DNVEGNSTVL PRNAENGNLV EDFGVDESAA LDTYFPSSWL EIQAEEFYME 660 ISQKSFRLQN YWEFVKVWVE FQDPLEETFS HTPVQRNLAK QGKVTIRNTI LHGYLKVPQL 720 KRLIAILFLL RTTHFHHQCM WKVIRILLVK RTVTTMVSTF LETLTMASMK KTMVEVEKNR 780 RKGNANVTVK IRRTKLSKGV LHFMEFQGGF ETEEEAARAH DLAALKLWGD FATLNFTLNE 840 YKKELEEMQG MSKQDYFLHI RRNSYHKKWQ ARLGKGGGLK GVYLATEEEA ARAYDVAAIR 900 MKGTKAVTNF DLSQYDLNSI FNSAKLPIGK GASKKLRWSS VDDVLENRRS SGANQKIPIL 960 QLHEDYSTGI SRLSSTTQPS LFDPTVHQIL PTPNNSNLNQ YESPFSHHAL QNTDIQYNQL 1020 PPSSQVHDGY QNLNFQRSPS LNQWIGTYGG GDNSEGSGSS VGGSHIYGSL DGDPTMRQFV 1080 DGNSSGFSFG RDVENHEFDQ LHQHNSDSYS QYLNQNPSFS SPLQDSMQVP NYPQTFYPSF 1140 LPGLTNLDPG PSCVGESSRS VSQVPEVSLA AMLAETNQSC GNGIINEVFS LEHEVPVNIM 1200 EGNSTVQPGY AENGNFVEDF GVEKSAGLDL DDDFPASWVE IFLMTLEGSD CHV

Sequence ? help Back to Top

Protein Sequence Length: 1253 aa Download sequence

MPLRETLLAL STMNSSDTVY FPSPSSTHSI NSESRNYSPV FLNDFVIHPN QRHGLSLPMQ  60
SKNFYASELN DGFNNFHNNT SEVRQSHPTE FYPPSTLESP FFEAPNYYNN FPISNHPFSS  120
SLHDNGFTGG NNQNCNCFNM YGEPLISDSC SDEEDNGGKK KRKRHRKSKH TFGQRSSSGY  180
DTEEEAAKAY DIAALKLWGK SATLNFPLRK YRKDLKKMKR MSKEDYFNHI RRNSDNKRWQ  240
AKVGKGRGCK GIYLGTFDTE EEAARAYDVA VIRMKGITSV TNFDQSEYDV KGILECETLP  300
IGKGASKRVR WSSVDDVLKK GRNTKKKKPM LQLNNGDSSG ISKLIPRIPQ SCSSFEPTTH  360
QILPTLHNSN PTQYVDPFLR YAFQDTDIQN NQFLRYSNVH PSSQVPLPGY RNPNFQTNPS  420
FNNWAGTFGG GDNSEANFQT NPSVNNWVGA FGGGENSEGN GINVGGSQIY GTLDPTMAQI  480
GDDNSGYNLG RGIEHMEPLN QFAPSIPPQN QEFDQLDQYS SDAYGQCNNE SSSSSYLLQD  540
SLQVPNYTPT IDPTFLPGLT NLDPGPSYVG ESYDSVVPEA ILAAMLAETN ESCSRDIMNE  600
PLTVFDYEVP DNVEGNSTVL PRNAENGNLV EDFGVDESAA LDTYFPSSWL EIQAEEFYME  660
ISQKSFRLQN YWEFVKVWVE FQDPLEETFS HTPVQRNLAK QGKVTIRNTI LHGYLKVPQL  720
KRLIAILFLL RTTHFHHQCM WKVIRILLVK RTVTTMVSTF LETLTMASMK KTMVEVEKNR  780
RKGNANVTVK IRRTKLSKGV LHFMEFQGGF ETEEEAARAH DLAALKLWGD FATLNFTLNE  840
YKKELEEMQG MSKQDYFLHI RRNSYHKKWQ ARLGKGGGLK GVYLATEEEA ARAYDVAAIR  900
MKGTKAVTNF DLSQYDLNSI FNSAKLPIGK GASKKLRWSS VDDVLENRRS SGANQKIPIL  960
QLHEDYSTGI SRLSSTTQPS LFDPTVHQIL PTPNNSNLNQ YESPFSHHAL QNTDIQYNQL  1020
PPSSQVHDGY QNLNFQRSPS LNQWIGTYGG GDNSEGSGSS VGGSHIYGSL DGDPTMRQFV  1080
DGNSSGFSFG RDVENHEFDQ LHQHNSDSYS QYLNQNPSFS SPLQDSMQVP NYPQTFYPSF  1140
LPGLTNLDPG PSCVGESSRS VSQVPEVSLA AMLAETNQSC GNGIINEVFS LEHEVPVNIM  1200
EGNSTVQPGY AENGNFVEDF GVEKSAGLDL DDDFPASWVE IFLMTLEGSD CHV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	159	167	KKKRKRHRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	2e-42	AP2 family protein