PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0003586.1_g020.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 229aa MW: 26322 Da PI: 9.2864

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0003586.1_g020.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70.4	4.1e-22	42	130	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 +fYn+YA +GF +r ++s + + ++ei +++fvC k+g ++++++ +++r+r +r++Ckak++v k++ ++k+ ++ + + Pav_sc0003586.1_g020.1.br 42 NFYNRYAFLAGFGIRLHSSFRGTYKKEILRKEFVCCKQGAYRKDETR--ERKRQRGISRCNCKAKIVVVKTNgSKKYAISLFAE 123 6************************************99998877..9999*********9999998******* PP FAR1 84 eHnHela 90 HnH+++ Pav_sc0003586.1_g020.1.br 124 GHNHKMT 130 **986 PP

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence
MFGGSESDDC VTANGMVYIP EVRNEETPAV GMKFDSLDLA YNFYNRYAFL AGFGIRLHSS 60 FRGTYKKEIL RKEFVCCKQG AYRKDETRER KRQRGISRCN CKAKIVVVKT NGSKKYAISL 120 FAEGHNHKMT DSERVHLLRS HRRISDSTKV LTKQLGSVNI PIHQKVSIFE VQSGGMDKID 180 FIKKDIYNLE CSVNGKLRNH DVELVTEYFM AEQKKNEAFY FKIEGDGED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-26	FAR1 family protein