PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0004305.1_g160.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 178aa MW: 19915.2 Da PI: 5.9528

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0004305.1_g160.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.3	1.1e-10	80	109	1	30
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIart 30 +g+WT+eEd +l+++++ +G ++WktIa++ Pav_sc0004305.1_g160.1.mk 80 KGAWTAEEDHKLAEVIEVHGAKRWKTIASK 109 79**************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 178 aa Download sequence
MCSSWGFVSS LPSRRLDDRA ASLHNLVSQK ASQNLSLSLS VSLSNTLTQS DPMAPMTEES 60 IKRKVKAGEA MKSSKKEVNK GAWTAEEDHK LAEVIEVHGA KRWKTIASKA AEHHQKVHIE 120 MKEDSSSEEG ASFASKETNK NMNNIDVDDF FDFSNEGPLN LEWVSKFLDF DDGRWLIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28110.1	7e-08	MYB family protein