PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0004666.1_g030.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 104aa    MW: 12209.2 Da    PI: 9.0902
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0004666.1_g030.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.40.000475171323
                               ETTTTEEESSHHHHHHHHHHT CS
                    zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
                               C  C  +F++   L++H+ +H
  Pav_sc0004666.1_g030.1.mk 51 CCMCLARFNTLGGLQSHQIKH 71
                               99****************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    
MGIQDFEEDE GCEEKTQNSL LDEEEKKKKK KVRKLTRNMQ KKNQKKYDVG CCMCLARFNT  60
LGGLQSHQIK HSKYFKACQV CSLRFASYLE YQDHVCPPKP MLKV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12535EKKKKKKVRKL
22634KKKKKKVRK
32646KKKKKKVRKLTRNMQKKNQKK