PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0004917.1_g050.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 71aa    MW: 7995.77 Da    PI: 7.3383
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0004917.1_g050.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY50.44.3e-163392359
                               EEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY 23 sYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                               +YY+C+s gC+vkk+ver++ed ++v++tY g Hnhe
  Pav_sc0004917.1_g050.1.mk  3 NYYKCSSGGCNVKKRVERDREDSSYVITTYDGVHNHE 39
                               6***********************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 71 aa     Download sequence    
MGNYYKCSSG GCNVKKRVER DREDSSYVIT TYDGVHNHES PCVLYYNQMP TPVDPNNIWT  60
LRASSQSSAS S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.18e-22WRKY family protein