PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0004999.1_g050.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 216aa    MW: 24286.9 Da    PI: 7.3948
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0004999.1_g050.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.48.8e-101442129
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIar 29
                               +g+WT+eEd++l+d+++ +G g+W++ ++
  Pav_sc0004999.1_g050.1.mk 14 KGAWTKEEDQRLIDYIRVHGEGCWRSLPK 42
                               79**********************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MGRSPCCEKA HTNKGAWTKE EDQRLIDYIR VHGEGCWRSL PKAAAPTPAS RLDFRNISPP  60
SAVVDKTTNK NSILNHKTIN TTSSNNNNNI VLFKPKMEED NIEEASSGTT TEEDHQQQQH  120
QQQKLQDHYM YKCSDLNLDL SIGLEPFQSE PTRASSGNSA ESRLQQNNYQ VFGTVQKAVV  180
TQAVCLCCQV GFQSSEACRN CQCTNGFYRF HRPLNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09460.14e-26MYB family protein