PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0005051.1_g010.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family CAMTA
Protein Properties Length: 157aa    MW: 17766.3 Da    PI: 9.7851
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0005051.1_g010.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-11345.2e-4269156289
                       CG-1   2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyY 85 
                                l+ k+rwl++ ei++iL n++k+++++e+++ p+ gsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+v+vl+cyY
  Pav_sc0005051.1_g010.1.mk  69 LEAKHRWLRPAEICEILRNYNKFHISSEPASMPPGGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYY 152
                                5669******************************************************************************** PP

                       CG-1  86 ahse 89 
                                ah+e
  Pav_sc0005051.1_g010.1.mk 153 AHGE 156
                                **98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MYEIQVGSGC GISVTTTRIE FMADTKRYGL GNQLGNDKVP PPSILSKSAR IKSGNSVTMS  60
DQDIAQILLE AKHRWLRPAE ICEILRNYNK FHISSEPASM PPGGSLFLFD RKVLRYFRKD  120
GHNWRKKKDG KTVKEAHERL KAGSVDVLHC YYAHGEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.22e-55CAMTA family protein