PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0005603.1_g060.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 65aa    MW: 7626.74 Da    PI: 11.086
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0005603.1_g060.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-182465247
                        AP2  2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaai 47
                                y+GVr+++ +g+W++eIrd         +rf+lg+f taeeAa+a++
  Pav_sc0005603.1_g060.1.mk 24 NYRGVRQRP-WGKWAVEIRDlR-----GaTRFWLGTFTTAEEAARAYD 65
                               59*******.**********44.....36******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 65 aa     Download sequence    
MPVFTQEEKA NNNKKGPKKK VKKNYRGVRQ RPWGKWAVEI RDLRGATRFW LGTFTTAEEA  60
ARAYD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.11e-18ERF family protein