PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0006064.1_g050.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 252aa MW: 28372.9 Da PI: 7.3034

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0006064.1_g050.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	91.3	1.3e-28	88	175	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++ k r+raetr+gC+a++ v+k ++gkw+vtk+++eH Pav_sc0006064.1_g050.1.mk 88 FYNAYATRVGFIIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDKRE--KIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEH 169 ****************************************9988..9******************************* PP FAR1 86 nHelap 91 +H+l+p Pav_sc0006064.1_g050.1.mk 170 THPLTP 175 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
MEFSVDGDVS GEVVGSSAEV EISRAGDENE TGGSSIEGAF QLGQDDKMNQ DSPGKDIIPQ 60 AVPVVSVVPA DEPYVGQEFE TEAAAHAFYN AYATRVGFII RVSKLSRSRR DGTAIGRALV 120 CNKEGYRMPD KREKIVRQRA ETRVGCRAMI LVRKVSSGKW VVTKFVKEHT HPLTPGKGRR 180 DCIYDQYPNE HDKIRELSQQ LAIEKKRAAT YKRHLDLIFE HIEEHNESLS KKIQHIVESV 240 KEIEGKEQQQ HR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	8e-99	FAR1 family protein