PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0006393.1_g030.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family EIL
Protein Properties Length: 228aa    MW: 26083.9 Da    PI: 8.2115
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0006393.1_g030.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3174.98.2e-5429197146321
                                HHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTT CS
                       EIN3 146 SLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeireler 229
                                SLL  + qh  p qrrfplekg++pPWWPtG+elww+ +g+s d+g+ppy+kphdlkk wkvs L+avikhm+p+++++++l+r
  Pav_sc0006393.1_g030.1.br  29 SLLTFQQQHYVPAQRRFPLEKGLAPPWWPTGEELWWDDKGVSIDHGAPPYRKPHDLKKDWKVSALAAVIKHMAPNSDRMKRLVR 112
                                9*********************************************************************************** PP

                                TSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX...XXXXXXXX CS
                       EIN3 230 qskylqdkmsakesfallsvlnqeekecatvsahssslrkqspkvtlsceqkedvegkkeskikhvqavktta...gfpvvrkr 310
                                qsk+lqdkm+ake  ++++v+nqee++++            ++ +++s +++++ ++++ s  ++++ +++ +   ++p  +kr
  Pav_sc0006393.1_g030.1.br 113 QSKCLQDKMTAKEIEIWSKVVNQEEALLQ----------LTETCLKISYSNEKEDQKESPSGLSQIKGKNNGKwmcSLPSSEKR 186
                                *************************9774..........245556667776666666666665555554444344455555555 PP

                                XXXXXXXXXXX CS
                       EIN3 311 kkkpsesakvs 321
                                 +   ++++++
  Pav_sc0006393.1_g030.1.br 187 TSSIFDEEACQ 197
                                55555555554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MIEPGSEAML EFCEEQMKKA KNTGRIKSSL LTFQQQHYVP AQRRFPLEKG LAPPWWPTGE  60
ELWWDDKGVS IDHGAPPYRK PHDLKKDWKV SALAAVIKHM APNSDRMKRL VRQSKCLQDK  120
MTAKEIEIWS KVVNQEEALL QLTETCLKIS YSNEKEDQKE SPSGLSQIKG KNNGKWMCSL  180
PSSEKRTSSI FDEEACQTGQ GLKSFELGLW FVDKKSKVDH ESVGVFIE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-58EIL family protein