PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0007430.1_g030.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ZF-HD
Protein Properties Length: 213aa    MW: 23062.8 Da    PI: 9.7697
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0007430.1_g030.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer42.91.1e-131282957
                ZF-HD_dimer 29 mpsegeegtaaalkCaACgCHRnFHRrev 57
                               mp+ g+egt +alkCaAC+CHRnFHR+e 
  Pav_sc0007430.1_g030.1.mk  1 MPA-GAEGTLDALKCAACNCHRNFHRKEG 28
                               566.8899*******************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MPAGAEGTLD ALKCAACNCH RNFHRKEGDS GGLALMNADP YGQLVPLHGQ HNHPQFSPYY  60
RTPAGYLHVA PPHRPHNHPQ FSPYYRTPAG YLHVAPHHRP LALPSTSGGG GTHSRGEEQE  120
DDVSNPSGGG GGGGGLGMGG GVHGTASSGK KRFRTKFTAE QKERMLTLAE TLGWRIQKQD  180
EPAIQQFCNE TGVKRNVLKV WMHNNKHTLG KKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.18e-46ZF-HD family protein