PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0007489.1_g010.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family M-type_MADS
Protein Properties Length: 69aa    MW: 7695.91 Da    PI: 8.9381
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0007489.1_g010.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF231e-0752682541
                               HHHHHHHT-EEEEEEE- CS
                     SRF-TF 25 eELSvLCdaevaviifs 41
                               +ELS LCdaeva+i++s
  Pav_sc0007489.1_g010.1.mk 52 YELSLLCDAEVALIVVS 68
                               8**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 69 aa     Download sequence    
MQLWPMKTNP CIWTLPNENW FGERSRSSGS KTHQTVKSPS AKGAMGCSRR PYELSLLCDA  60
EVALIVVSL