PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0008618.1_g010.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 210aa    MW: 23954.9 Da    PI: 6.9568
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0008618.1_g010.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-18755254
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54
                               +y+GVr+++ +g+Wv+eIr+p        +r++lg+f tae+Aa+a+++a++ + 
  Pav_sc0008618.1_g010.1.mk  7 RYRGVRQRH-WGSWVSEIRHP-----LlkTRIWLGTFETAEDAARAYDEAARLMC 55
                               69******9.**********8.....334**********************8775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MARSQQRYRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPKAR  60
TNFSYNPNET MSHSSKLLSA ALIAKLHKCN MASLQMAKTT NNKPVPKEEP QQQVHYTPAA  120
PSATCIIETG DVSGFDWPEK IREYSGVQKR VEQGSWVGGG DLVLKSPHDH QQHHQHQQEF  180
IERLEDDHIE QMIEELLDYG HIEICPGVST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.13e-40ERF family protein