PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0008890.1_g030.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 216aa MW: 23849.8 Da PI: 4.6568

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0008890.1_g030.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	71.6	2e-22	18	106	1	99
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWk 84 l pGfrF+Ptdeel+++yLkkk++g++ e+ ++i+e++++++eP+dLp yfFsk + +++++r r+t +g+ k Pav_sc0008890.1_g030.1.br 18 LLPGFRFSPTDEELLSYYLKKKIAGEDSEF-SFIPEINVCELEPRDLP---------EYFFSKPNYMNTNSNRCFRTTGEGFYK 91 579**********************888.89**********9.........4********************** PP NAM 85 atgkdkevlskkgel 99 +tg+ +ev+++ +++ Pav_sc0008890.1_g030.1.br 92 STGHVREVKAELSQA 106 ******9974443 PP

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence
MSNSGGTTDG GVSVPTSLLP GFRFSPTDEE LLSYYLKKKI AGEDSEFSFI PEINVCELEP 60 RDLPEYFFSK PNYMNTNSNR CFRTTGEGFY KSTGHVREVK AELSQAVIGG VVLNHLTTKS 120 VNYKKRRYDS ICDKLAEPGI ASNYKDDQAA AAANMIPHFV NNNDISTLDV GLPGGCFSSG 180 SDILAVNDSF HEVSFQPDYW EMLCMPINTQ IPIGMQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10490.1	7e-22	NAC family protein