PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0009436.1_g010.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 79aa    MW: 8903.12 Da    PI: 5.7987
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0009436.1_g010.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR124.77.8e-084279138
                       FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCske 38
                               ++Yn+YA  +GF +r ++s   + ++ei +++fvC k+
  Pav_sc0009436.1_g010.1.br 42 NYYNKYAFLAGFGIRLHSSFPGTYKKEILRKEFVCCKQ 79
                               69*********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 79 aa     Download sequence    
MSGGSESDDC VTANGMVYIP EVRNEETPAV GMKFDSLDLA YNYYNKYAFL AGFGIRLHSS  60
FPGTYKKEIL RKEFVCCKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52520.18e-09FAR1 family protein