PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0009560.1_g010.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 171aa    MW: 19854.2 Da    PI: 5.2799
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0009560.1_g010.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM30.11.4e-0983116235
                        NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevik 35 
                                ppG+rF+P deel+v+yLkkkv  ++l+ +++i+
  Pav_sc0009560.1_g010.1.mk  83 PPGYRFNPLDEELIVHYLKKKVLYQPLPPNRIIE 116
                                9***********************9987755443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MEPVEQSHQH HKASVTSQVA SYRLINKQSH AQAHLTHELT QPNEPGNSFI TNVSAGTELS  60
DDESNSFNNN LKNEEDEFFN SFPPGYRFNP LDEELIVHYL KKKVLYQPLP PNRIIELDNW  120
VLCRIYKKVD KNSKRCETRN HVEDSLSPQP QIINGEGMEM EMEMRTLFDP M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.17e-10NAC family protein