PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0011567.1_g010.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YB
Protein Properties Length: 92aa    MW: 10274.3 Da    PI: 9.0943
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0011567.1_g010.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB78.97.2e-2523804097
                      NF-YB 40 sefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97
                                e  sf+t++asdkc rekrktingddllw ++tlGfe+yv plk y ++yre++gek
  Pav_sc0011567.1_g010.1.br 23 KEQDSFITGKASDKCLREKRKTINGDDLLWVMTTLGFENYVGPLKGYRNEYRETKGEK 80
                               57779**************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
GKRNQTSPVG SPLSGNVSDS SSKEQDSFIT GKASDKCLRE KRKTINGDDL LWVMTTLGFE  60
NYVGPLKGYR NEYRETKGEK NSMARQEDPS QQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.12e-28NF-YB family protein