PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g000310.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HB-other

Protein Properties

Length: 662aa MW: 75088.6 Da PI: 5.8381

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g000310.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	17.6	6.6e-06	401	458	6	51
S--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNr 51 ft++++ e+e+l + ++ +s+e ++LA++ ++t +qV+ WFqN+ Pd.00g000310.m01 401 VFTHSEIMEMENLIKHprQQSLSQEFFQDLATSFsctpiragkpDITWEQVQSWFQNK 458 69*********99555*************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 662 aa Download sequence
MAASPQPVSE NPIDFRAPPP SPIASGRRSL VTNDEVLTEY LEHSLQVPDL ILPDKFFPKQ 60 NSLENPPTID LLALNLDEFD ASLCKVVESI ARNGCFQLVN HGISSELVSS VQAAATGIFQ 120 VPPEKRAEIT RLPEKPYGFE EVHGEEVGSE LSEEFVWCRD QGLKLTMERI APIGYSNFSE 180 KLETLMTDIE KVSGKILPSL LKNSQTKFVY GNDDTVQGKE LGTVCCLYKH SQNVLEDEWD 240 SSLRYDVIKM LIRGTDYSHA LCLHLCDGSS EFHVYSKKGW VSFTPDKNAL VVTTGDQIQA 300 WSGGQYKHVI GRPIFKGNAN HKINTNKFPS IQLEGVCAYY DFQLATGSKS RRHRSSSEPR 360 LLSKPPLGVE LRLKTQKPRE KEMDMELFRT RKREPMNSLS VFTHSEIMEM ENLIKHPRQQ 420 SLSQEFFQDL ATSFSCTPIR AGKPDITWEQ VQSWFQNKQK ELQANSNSSP TALELFVDLS 480 DSNVSSNATE NSQKPKGKWS TELHELAFEA RSARDDAWYD VASFLSYRVV NSGELEVRVR 540 YSGFGREDDE WVNVTRAVRE RSIPLEASEC HKVKVGDLVL SFQEREHQAV YCDAHVVDIQ 600 RGLHDVTGCK CIFVVRFDHD NTEEEIQLGR LCIRPAQNTS AVTNTQQHDL FRNKDMKFSF 660 LY

Sequence ? help Back to Top

Protein Sequence Length: 662 aa Download sequence

MAASPQPVSE NPIDFRAPPP SPIASGRRSL VTNDEVLTEY LEHSLQVPDL ILPDKFFPKQ  60
NSLENPPTID LLALNLDEFD ASLCKVVESI ARNGCFQLVN HGISSELVSS VQAAATGIFQ  120
VPPEKRAEIT RLPEKPYGFE EVHGEEVGSE LSEEFVWCRD QGLKLTMERI APIGYSNFSE  180
KLETLMTDIE KVSGKILPSL LKNSQTKFVY GNDDTVQGKE LGTVCCLYKH SQNVLEDEWD  240
SSLRYDVIKM LIRGTDYSHA LCLHLCDGSS EFHVYSKKGW VSFTPDKNAL VVTTGDQIQA  300
WSGGQYKHVI GRPIFKGNAN HKINTNKFPS IQLEGVCAYY DFQLATGSKS RRHRSSSEPR  360
LLSKPPLGVE LRLKTQKPRE KEMDMELFRT RKREPMNSLS VFTHSEIMEM ENLIKHPRQQ  420
SLSQEFFQDL ATSFSCTPIR AGKPDITWEQ VQSWFQNKQK ELQANSNSSP TALELFVDLS  480
DSNVSSNATE NSQKPKGKWS TELHELAFEA RSARDDAWYD VASFLSYRVV NSGELEVRVR  540
YSGFGREDDE WVNVTRAVRE RSIPLEASEC HKVKVGDLVL SFQEREHQAV YCDAHVVDIQ  600
RGLHDVTGCK CIFVVRFDHD NTEEEIQLGR LCIRPAQNTS AVTNTQQHDL FRNKDMKFSF  660
LY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18380.1	5e-56	HB-other family protein