PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g001700.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family SRS
Protein Properties Length: 230aa    MW: 25544.7 Da    PI: 8.7218
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g001700.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702192.41.6e-59131565154
            DUF702   5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaesk 97 
                       +++CqdCGnqakk+C+++RCRtCCks+gf+C+thvkstWvp+++rr++q    aa  ++  + ++++ +++++     +  +++ + +s++++
  Pd.00g001700.m01  13 ASRCQDCGNQAKKECVYMRCRTCCKSKGFHCQTHVKSTWVPVYRRRQQQL-PGAAIPQQHLQLHHEQGHHHQN----PKRPAEHLTNPSSSTR 100
                       569*****************************************998544.4444344433333333333332....3333444444555445 PP

            DUF702  98 keletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                          +  ++P+ev+s+a f+cvrvssv+d  ++ aYqt+v igGhvfkGiL dqG+++
  Pd.00g001700.m01 101 L-DQEVNFPAEVNSMATFKCVRVSSVEDMVDQHAYQTSVVIGGHVFKGILCDQGPDH 156
                       4.44556************************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MVKRGGEGGV IMASRCQDCG NQAKKECVYM RCRTCCKSKG FHCQTHVKST WVPVYRRRQQ  60
QLPGAAIPQQ HLQLHHEQGH HHQNPKRPAE HLTNPSSSTR LDQEVNFPAE VNSMATFKCV  120
RVSSVEDMVD QHAYQTSVVI GGHVFKGILC DQGPDHHHQN CYTTVGQSSS SHHVLLNRKT  180
SNSINAAANT ASTSSAPDPA DQVPHHHPPS YPLIPFNAFM PGTQFFINPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21400.12e-46SRS family protein