PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g002380.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 92aa    MW: 10323.6 Da    PI: 9.3975
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g002380.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.92.1e-0919601454
                      HHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
               HLH 14 driNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                      d+iN+  ++L++llP+ +   +s K+  a++L+++++YI+sL
  Pd.00g002380.m01 19 DQINDLVSKLQQLLPEiRNTRRSDKVPAATVLQETCNYIRSL 60
                      79**************99999*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MSSRRSRSRQ SGGARISDDQ INDLVSKLQQ LLPEIRNTRR SDKVPAATVL QETCNYIRSL  60
HREVDDLSER LSELLATTDS AQAAVIRSLL SQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74500.18e-41bHLH family protein