PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g004360.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 175aa    MW: 20148.9 Da    PI: 10.0148
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g004360.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM53.39e-1717058127
               NAM  58 wyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapk.gektdWvmheyr 127
                       +yfF++ ++k + ++ ++r++++gyW  t k +++ + ++e +g+kk+L fy gr+++ ++kt+W+m ey 
  Pd.00g004360.m02   1 MYFFTRVERKFTDSTLPRRKARNGYWIPTSKYENIEQ-GTEIIGVKKSLRFYAGRHRNaSTKTNWTMLEYI 70 
                       5**********************************99.999***********997665157*********6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MYFFTRVERK FTDSTLPRRK ARNGYWIPTS KYENIEQGTE IIGVKKSLRF YAGRHRNAST  60
KTNWTMLEYI AGGTASAAVS QSHYFLYDWV LCKVYEEELS AKKVPESNNQ GNAANEEVTG  120
EQLHPHVDKN FPLGRSIWSK KEAMLVQEFR PITPNNMYKL ISKALLTGAS LRSHH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.17e-16NAC family protein