PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g004810.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 345aa    MW: 37062.7 Da    PI: 6.4034
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g004810.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.90.00016153175123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       ++C+ C++ Fs++  L  H++ H
  Pd.00g004810.m01 153 FTCNFCKREFSTSQALGGHQNAH 175
                       89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MPRMGAELRL ERLSPTSEAS NISATSDDLP PTKKNGPENL NQKLKEKIVI DDSDDDDTQQ  60
PPQQPPPPPV VSSSSSPSPS SRLRLDLKLC NDDSAHGLGS SSSRVELSLF NPSNLDASNP  120
GSSNPVSGYS QPNETTDENP RGSDDKRSQP RVFTCNFCKR EFSTSQALGG HQNAHKQERA  180
LAKRQQGGLE NMGGVLGHSP FSYYNPYSSL SSPSLYGSFN RSLGVRMDSM IHKPSYPWSS  240
TPGFGRFGPS SGAWSSRAGS LLNFQSTMDR LNLEGLHANA PSGISGLPGT SSASRFDKEI  300
GVVHNFGGSN SNSEINRPIL GDLLRREPPT SDIDTAGLDL SFVLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24625.13e-17C2H2 family protein